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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015938625.1_cds_XP_016483429.1_74544
CDS Infomation

[gene=LOC107804113] [db_xref=GeneID:107804113] [protein=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin), chloroplastic-like] [protein_id=XP_016483429.1] [location=join(1577..1797,1866..1966,2049..2125,3083..3313,3772..3867)] [gbkey=CDS]
Sequence

ATGGAGAGAAAGAATAAAAAGAAAGAAAAAGAGAAAGAAAAGATAGACACAAATCAGAAA
AAATTGTTGAACCACCCAAGGATGTGCAATGGACGAGACTGCTCTTCTCTCAACCAGAGG
TCTCGGGTTCGAGCTCTGGATATGGAGAAATACTTAATAGGGAATGCTCCCCCTGAATGG
GGCCTTAAGCGGCAAAAATCCGGATATAATCGAGCTCCAATTTACAACATCCCTCTGGTG
GCTGACATTCATTTTGCTCCTCCTATTGCACTTCGAGTTGCTGAGTGCTTTGAAAAAATA
CGTGTCAATCCTGGAAACTTTACTGACAGGCGAGCCCAGTTTGAGCAATTAGAGTACACA
GAAGAAGACTACCAGAAAGAACTTGAGCACATTGAGGAGGTTGAATCAGCATTTGAGTTT
ACAAGAATTTGTCGAAAGTTGGACTTCCACAATTTCGTCTTCTCAATGAAAGCTAGCAAT
CCAGTAGTTATGGTCCAGGCGTATCGCCTTCTTGTAGCTGAGATGTATGTTCAAGGATGG
GATTATCCTTTACACTTGGGAGTTACTGAAGCTGGTGAAGGTGAGGACGGAAGGATGAAG
TCTGCAATCGGTATTGGCACGCTTCTTCAGGATGGTCTGGGTGATACAATAAGGGTTTCC
CTAACTGAACCTCCAGAGGAGGAGATAGATCCCTGTCGACGGTTGGCAAACCTTGGACGT
CCATAA

Peptide Sequence

PEP ID

XP_016483429.1
PEP Infomation

PREDICTED: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin), chloroplastic-like [Nicotiana tabacum]
Sequence

MERKNKKKEKEKEKIDTNQKKLLNHPRMCNGRDCSSLNQRSRVRALDMEKYLIGNAPPEW
GLKRQKSGYNRAPIYNIPLVADIHFAPPIALRVAECFEKIRVNPGNFTDRRAQFEQLEYT
EEDYQKELEHIEEVESAFEFTRICRKLDFHNFVFSMKASNPVVMVQAYRLLVAEMYVQGW
DYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEEEIDPCRRLANLGR
P

Transcript Sequence

Gene sequence data has not been registered.